FAM50A: Key Oncogenic Splicing Factor in ESCC, Potential Target for Combination Therapy with Rifabutin

October 20, 2026
FAM50A: Key Oncogenic Splicing Factor in ESCC, Potential Target for Combination Therapy with Rifabutin
  • Direct binding of FAM50A to SDK1 intron 1 promotes circSDK1 biogenesis, and circSDK1 in turn amplifies FAM50A-driven oncogenic effects by activating MAPK/FAK signaling and boosting EMT and anoikis resistance in ESCC.

  • FAM50A emerges as a pivotal oncogenic splicing factor in ESCC, linking splicing regulation to MAPK/FAK-driven tumor progression via circSDK1 and marking it as a potential therapeutic target.

  • FAM50A activates MAPK and FAK signaling, strengthens cell–extracellular matrix adhesion, and promotes EMT, collectively fueling ESCC progression.

  • Inhibitors targeting FAM50A, including rifabutin, were identified and show a synergistic effect with cisplatin, suggesting a potential combination therapy strategy.

  • FAM50A is upregulated in ESCC and associates with poorer prognosis across multiple cohorts and tissue samples.

  • Functional studies show FAM50A drives malignant ESCC phenotypes such as increased proliferation, migration, invasion, and tumor growth, while knockdown reduces these traits and enhances anoikis.

  • Rescue experiments indicate circSDK1 overexpression can compensate for FAM50A knockdown, restoring proliferation, migration, adhesion, and MAPK/FAK activation; conversely, circSDK1 knockdown blunts FAM50A-driven effects.

  • FAM50A binds spliceosomal components and directly interacts with RNA, regulating canonical alternative splicing and backsplicing to generate circRNA products.

  • RIP-seq and proteomic analyses identify FAM50A as a spliceosome-associated RNA-binding protein with genome-wide binding, notably affecting specific AS events such as inclusion of CRTC1 exon 3.

Summary based on 1 source


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