Breakthrough in CRISPR Evolution: Chinese Scientists Unveil RNA Innovations Driving Genomic Advancements

September 29, 2025
Breakthrough in CRISPR Evolution: Chinese Scientists Unveil RNA Innovations Driving Genomic Advancements
  • Experiments showed that artificially splitting TnpB's reRNA into two parts could convert it into a CRISPR-like system, enabling it to utilize guide RNAs from CRISPR arrays, marking a pivotal step in CRISPR evolution.

  • Further engineering confirmed that this split reRNA approach was sufficient to transform TnpB into a functional CRISPR-like system.

  • Genomic analysis identified 146 TnpB-like proteins and uncovered six intermediate clades called TranCs, which represent evolutionary stages between TnpB nucleases and Cas12.

  • Phylogenetic and structural studies, including AlphaFold modeling, delineated these six TranC clades as key intermediates in the transition from transposon systems to CRISPR immunity.

  • The research traced the evolutionary lineage of these proteins, revealing their significance in the development of CRISPR systems.

  • Understanding this molecular evolution enhances our capacity to develop advanced genetic engineering technologies with potential applications in medicine and agriculture.

  • Functional assays discovered that some TranC systems utilize dual-guide RNAs—both intrinsic CRISPR RNAs and transposon-derived reRNAs—indicating their role as evolutionary intermediates.

  • A novel dual-guide RNA mechanism was identified, representing an evolutionary step towards the complex guide systems seen in modern CRISPR-Cas systems.

  • These systems demonstrate how dual-guide RNA mechanisms can facilitate DNA targeting, highlighting the evolutionary sophistication of these intermediate systems.

  • Recent research from Chinese scientists has shed light on the molecular evolution of Type V CRISPR-Cas systems, especially focusing on Cas12, a powerful genome editing tool.

  • The study highlights that the diversification of RNAs derived from transposons played a crucial role in this evolution, emphasizing RNA-level innovations over changes in protein structure.

  • Findings demonstrate that RNA innovations can transform TnpB proteins into CRISPR-like systems capable of guiding DNA targeting, offering new avenues for engineering smaller, versatile genome editing tools.

  • The research also explores how transposon activity, involving TnpB nucleases and their relation to Cas12 effectors, contributed to the emergence of CRISPR immunity systems.

Summary based on 3 sources


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